A Nonlinear Elasticity Model of Macromolecular Conformational Change Induced by Electrostatic Forces.

نویسندگان

  • Y C Zhou
  • Michael Holst
  • J Andrew McCammon
چکیده

In this paper we propose a nonlinear elasticity model of macromolecular conformational change (deformation) induced by electrostatic forces generated by an implicit solvation model. The Poisson-Boltzmann equation for the electrostatic potential is analyzed in a domain varying with the elastic deformation of molecules, and a new continuous model of the electrostatic forces is developed to ensure solvability of the nonlinear elasticity equations. We derive the estimates of electrostatic forces corresponding to four types of perturbations to an electrostatic potential field, and establish the existance of an equilibrium configuration using a fixed-point argument, under the assumption that the change in the ionic strength and charges due to the additional molecules causing the deformation are sufficiently small. The results are valid for elastic models with arbitrarily complex dielectric interfaces and cavities, and can be generalized to large elastic deformation caused by high ionic strength, large charges, and strong external fields by using continuation methods.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Bifurcation and Chaos in Size-Dependent NEMS Considering Surface Energy Effect and Intermolecular Interactions

The impetus of this study is to investigate the chaotic behavior of a size-dependent nano-beam with double-sided electrostatic actuation, incorporating surface energy effect and intermolecular interactions. The geometrically nonlinear beam model is based on Euler-Bernoulli beam assumption. The influence of the small-scale and the surface energy effect are modeled by implementing the consistent ...

متن کامل

The effect of small scale and intermolecular forces on the nonlinear Pull-in instability behavior of nano-switches using differential quadrature method

Using differential quadrature method (DQM), this study investigated pull-in instability of beam-type nano-switches under the effects of small-scale and intermolecular forces including the van der Waals (vdW) and the Casimir forces. In these nano-switches, electrostatic forces served as the driving force, and von-Karman type nonlinear strain was used to examine nonlinear geometric effects. To de...

متن کامل

بررسی اثر میرایی ترموالاستیک در مدل غیرخطی تشدیدکننده های میکروالکترومکانیکی با روش تربیع دیفرانسیلی

: In this paper, a nonlinear model of clamped-clamped microbeam actuated by electrostatic load with stretching and thermoelastic effects is presented. Free vibration frequency is calculated by discretization based on DQ method. Frequency is a complex value due to the thermoelastic effect that dissipates the energy. By separating the real and imaginary parts of frequency, quality factor of therm...

متن کامل

Static Pull-in Analysis of Capacitive FGM Nanocantilevers Subjected to Thermal Moment using Eringen’s Nonlocal Elasticity

This paper aims to investigate the pull-in phenomenon of functionally graded (FG) capacitive nanocantilevers subjected to an electrostatic force and thermal moment due to an applied voltage and thermal shock considering intermolecular force within the framework of nonlocal elasticity theory to account for the small scale effect. The FG nano-beam is made of mixture of metal and ceramic which the...

متن کامل

Nonlinear elasticity of an a-helical polypeptide

We study a minimal extension of the wormlike chain model to describe polypeptides having a-helical secondary structure. In this model the presence or absence of secondary structure enters as a scalar variable that controls the local chain bending modulus. Using this model we compute the extensional compliance of an a-helix under tensile stress, the bending compliance of the molecule under exter...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Journal of mathematical analysis and applications

دوره 340 1  شماره 

صفحات  -

تاریخ انتشار 2008